The Ecology and Evolution of Cancer
Description
This workshop explores research in methods aimed at connecting mathematical models of cancer evolution and clinical data. It focuses on ecology and evolution of cancer. Traditionally, ecology and evolution have been the most "mathematical" (and perhaps the first mathematical) areas of biology. Mathematical contributions to these fields made in the 20th century are now fundamental parts of scientific knowledge. More recently, methods of ecology and evolution have found their way into oncology, bridging traditional molecular biology and mathematics including stochastic processes, dynamical systems, and nonlinear partial differential equations. New biological challenges lead to difficult mathematical problems and beautiful solutions, which are both innovative mathematically and impactful from the point of view of public health. These will be the focus of the proposed workshop.
The workshop will combine several distinct (but interconnected) topics:
- Evolutionary parameters: determining evolutionary parameters from genomic data, reconstructing evolutionary histories from tumor ’omics data, from genes to function.
- Laws of evolution and cancer: spatial evolution, evolution in hierarchical populations, cooperation and predation, selection, resistance.
- Cellular plasticity in cancer and associated estimation/inference problems, epigenetics.
- Combining machine learning and modeling approaches to forecasting disease progression.
This workshop focuses on cutting-edge topics in the mathematical oncology community. The proposed topics span a wide range from evolutionary modeling, to data-driven approaches, including machine learning, parameter estimation and prediction. By bringing together these communities, we hope to foster collaborations that integrate the insights of mechanistic modeling with data-driven approaches, to address current problems in oncology.
For remote participation, please use the following Zoom link: https://zoom.us/j/92759411430
Schedule
09:15 to 09:30 |
Remarks by the Organizers
|
09:30 to 10:45 |
Fighting Drug Resistance with Math
Doron Levy, University of Maryland College Park |
10:45 to 11:15 |
Coffee Break
|
11:15 to 12:00 |
Mechanistic learning reveals the reciprocal cell fate transitions that drive disease progression in B-cell acute lymphoblastic leukemia
Jeffrey West, Moffitt Cancer Center |
12:00 to 14:00 |
Lunch
|
14:00 to 14:45 |
Modelling the impact of intra-tumour heterogeneity on radiotherapy outcomes
Giulia Celora, University College London |
15:00 to 15:30 |
Coffee Break
|
15:30 to 16:15 |
Personalized Cancer Care through Digital Twin Technology: Integrating Patient-Specific Data with Quantitative Systems Pharmacology
Leili Shahriyari, University of Massachusetts Amherst |
09:45 to 10:30 |
A mathematical model of evolution of drug-induced resistance
Eduardo Sontag, Northeastern University |
10:45 to 11:15 |
Coffee Break
|
11:15 to 12:00 |
Evolutionary rescue as a framework for understanding drug resistance in cancer
Matthew Osmond, University of Toronto |
12:00 to 14:00 |
Lunch
|
14:00 to 14:45 |
Defining selection in somatic evolution by modeling tumor-stromal interactions
David Basanta, Moffitt Cancer Center |
15:00 to 15:30 |
Coffee Break
|
15:30 to 16:15 |
Mathematical population genetics of bacteria: Evolutionary dynamics on multicopy plasmids
Hildegard Uecker, Max Planck Institute |
09:30 to 10:45 |
Decoding evolutionary information from cancer trees
Alison Feder, University of Washington, Seattle |
10:45 to 11:15 |
Coffee Break
|
11:15 to 12:00 |
Estimating clonal dynamics using coalescent theory and branching processes
Kit Curtius, University of California, San Diego |
12:00 to 14:00 |
Lunch
|
14:00 to 14:45 |
Mutation accumulation in healthy tissues
Weini Huang, Queen Mary University of London |
15:00 to 15:30 |
Coffee Break
|
15:30 to 16:15 |
Ecological niches for the development of drug-induced resistance
Kasia Rejniak, Moffitt Cancer Center |
09:45 to 10:30 |
Mathematical modeling of blood cancer and premalignancy
Morten Andersen, Roskilde University, Jordan Snyder, Roskilde University |
10:45 to 11:15 |
Coffee Break
|
11:15 to 12:00 |
Computational modeling of blood cancer evolution and patient prognosis
Thomas Stiehl, RWTH Aachen University |
12:00 to 14:00 |
Lunch
|
14:00 to 15:00 |
Discussion Time
|
15:00 to 15:30 |
Coffee Break
|
09:30 to 10:45 |
The site frequency spectrum in growing cancer cell populations
Jason Schweinsberg, University of California, San Diego |
10:45 to 11:15 |
Coffee Break
|
11:15 to 12:00 |
Genetic composition of supercritical branching populations under power law mutation rate
Vianney Brouard, ENS Lyon |
12:00 to 14:00 |
Lunch
|
14:00 to 14:45 |
Mathematical modelling of premalignant and disease phases of acute myeloid leukemia to accelerate the preclinical development of new therapies
Mia Brunetti, Université de Montréal |
15:00 to 15:30 |
Coffee Break
|
15:45 to 16:30 |
Combining machine learning and modeling approaches to forecasting disease progression
Mohammad Kohandel, University of Waterloo |